Publications

Google Scholar profile

Prior anti-CTLA-4 therapy impacts molecular characteristics associated with anti-PD-1 response in advanced melanoma. KM Campbell, M Amouzgar, SM Pfeiffer, TR Howes, E Medina, M Travers, G Steiner, JS Weber, JD Wolchok, J Larkin, FS Hodi, S Boffo, L Salvador, D Tenney, T Tang, MA Thompson, CN Spencer, DK Wells, A Ribas. Cancer Cell (2023) link

Evolution of stickleback spines through independent cis-regulatory changes at HOXDB. JI Wucherpfennig, TR Howes, JN Au, EH Au, GAR Kingman, SD Brady, AL Herbert, TE Reimchen, MA Bell, CB Lowe, AC Dalziel, and DM Kingsley. Nature Ecology & Evolution (2022) link

Impact of checkpoint blockade on cancer vaccine–activated CD8+ T cell responses. PM Santos, J Adamik, TR Howes, S Du, L Vujanovic, S Warren, A Gambotto, JM Kirkwood, and LH Butterfield. Journal of Experimental Medicine (2020) link

Detecting differential copy number variation between groups of samples. CB Lowe, N Sanchez-Luege, TR Howes, SD Brady, RR Daugherty, FC Jones, MA Bell, and DM Kingsley. Genome Research (2018) link

Dorsal spine evolution in threespine sticklebacks via a splicing change in MSX2A. TR Howes, BR Summers, and DM Kingsley. BMC Biology (2017) link

The genomic basis of adaptive evolution in threespine sticklebacks. FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, R Swofford, M Pirun, MC Zody, S White, E Birney, S Searle, J Schmutz, J Grimwood, MC Dickson, RM Myers, CT Miller, BR Summers, AK Knecht, SD Brady, H Zhang, AA Pollen, TR Howes, C Amemiya, Broad Institute Genome Assembly Team, ES Lander, F Di Palma, K Lindblad-Toh, DM Kingsley. Nature (2012) link